PROFASI  Version 1.5
Class List
Here are the classes, structs, unions and interfaces with brief descriptions:
[detail level 12]
oNprfThe namespace containing the key classes of PROFASI
oNprf_appApplication side classes expected to be used frequently
oNprf_traj
oNprf_utilsThe namespace containing auxiliary useful classes used inside PROFASI
oNprf_xml
oNUnivConstantsSet of frequently used constants
oCBasicMCRunConstant temperature Monte Carlo simulations
oCContactOrderRelative contact order
oCextract_propsCalculating run-time properties from traj files
oCextract_snapshotExtracting a snapshot configuration
oCminimizeMinimize an expression over degrees of freedom of a protein molecule
oCParTempRunParallel tempering class
oCPopulationHandlerHelper class for configuring the protein population
oCregularizerA program to regularize PDB structures
oCRetraceA program to retrace the path of an individual replica of parallel tempering
oCSimAnnealRunSimulated annealing
oCSimTempRunSimulated tempering with profasi
oCUpdatesHandlerA manager for MC updates
\CWLRunMonte Carlo simulations with the Wang Landau method

PROFASI: Protein Folding and Aggregation Simulator, Version 1.5
© (2005-2016) Anders Irbäck and Sandipan Mohanty
Documentation generated on Mon Jul 18 2016 using Doxygen version 1.8.2