PROFASI  Version 1.5
Modules | Classes
Utilities
Collaboration diagram for Utilities:

Modules

 ProFASi PDB handling module
 
 ProFASi XML module
 Basic XML parsing for ProFASi.
 
 PROFASI trajectory module
 Interface to trajectory files in PROFASI This module contains a set of classes to manage interpretation of trajectories (PROFASI trajectory files) .
 

Classes

class  prf_utils::AdaptiveHis
 A histogram that can adjust its own range according to the data. More...
 
class  prf_utils::His1D
 The default histogram utility in ProFASi is based on His1D. More...
 
class  prf_utils::His2D
 A histogram with 2 independent variables. More...
 
class  prf_utils::ProgOpt
 One option that a program may handle. More...
 
class  prf_utils::ProgArgs
 A utility to help manage program parameters. More...
 
class  prf::RMSD
 Root Mean Square Deviation. More...
 
class  prf_utils::Timer
 ProFASi's own timer for managing time limited runs. More...
 

Detailed Description

This is a diverse and loosely bound group of classes that are necessary for performing some actions on the concept classes grouped under the module Building Blocks .


PROFASI: Protein Folding and Aggregation Simulator, Version 1.5
© (2005-2016) Anders Irbäck and Sandipan Mohanty
Documentation generated on Mon Jul 18 2016 using Doxygen version 1.8.2