PROFASI Class Hierarchy

Go to the graphical class hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

• prf::Atom
• prf::AtomCoordinates
• prf::AtomDescriptor
• prf::AtomRecord
• prf::Backbone
• prf::CompositePredicate< T >
• prf::Contact
• prf::ContactFunction
  • prf::CaContact
  • prf::HBContact
  • prf::HPContact
  • prf::Proximity
• prf_utils::CorrelationBox
• prf_utils::CorrelationEvaluator
• prf::ExVolBase
  • prf::ExVol
  • prf::LocExVol
• prf::FindCoord
• prf_utils::His1D
  • prf_utils::AdaptiveHis
• prf_utils::His2D
• prf::HydrogenBond
  • prf::HBMM
  • prf::HBMS
• prf_app::InterfaceBase
  • BasicMCRun
    • extract_props
    • extract_snapshot
    • ParTempRun
    • SimAnnealRun
    • SimTempRun
• prf::Ligand
  • prf::AminoAcid
    • prf::Alanine
    • prf::Arginine
    • prf::Asparagine
    • prf::Aspartic_Acid
    • prf::Cysteine
    • prf::Glutamic_Acid
    • prf::Glutamine
    • prf::Glycine
    • prf::Histidine
    • prf::Isoleucine
    • prf::Leucine
    • prf::Lysine
    • prf::Methionine
    • prf::Phenylalanine
    • prf::Proline
    • prf::Serine
    • prf::Threonine
    • prf::Tryptophan
    • prf::Tyrosine
    • prf::Valine
• prf::MC
  • prf::ParTemp
• prf_utils::MeanFinder
• prf::Named
  • prf::Node
    • prf::ArginineTip
    • prf::ATetGroup
    • prf::ATriGroup
    • prf::DihedralGroup
    • prf::HistidineTip
    • prf::MPhenylGroup
    • prf::PhenylGroup
    • prf::TetrahedralGroup
    • prf::TrigonalGroup
    • prf::TryptophanTip
  • prf::Observable
    • ContactOrder
    • prf::AtomDistance
    • prf::Chi
    • prf::ContactMap
    • prf::Energy
      • prf::Bias
      • prf::ExVol
      • prf::HBMM
      • prf::HBMS
      • prf::Hydrophobicity
      • prf::LocExVol
    • prf::MCTotEnergy
    • prf::NativenessQ
    • prf::OligoOrient
    • prf::ProteinRMSD
    • prf::RC_phi
    • prf::RC_psi
    • prf::RCAngleRMSD
    • prf::RCBin
    • prf::Rg
  • prf::RandomNumberBase
    • prf::MersenneTwister
    • prf::Ran3nEngine
  • prf::Update
    • prf::BGS
    • prf::Pivot
    • prf::Rot
    • prf::Rotation
    • prf::Translation
• prf_app::ObsHandler
• prf::PDB_model
• prf_utils::Permutation
• prf::PopBase
  • prf::PDBReader
  • prf::Population
• prf_utils::ProgArgs
• prf_utils::ProgOpt
• prf::Protein
• prf_utils::RangeBox
• prf::RMSD
• prf::RMSD_Utils
• prf::SelRes
• prf::Shape
• prf::SimplePredicate< T >
  • prf::AtomTypeSelector
  • prf::isBackboneAtom
  • prf::isHeavyAtom
  • prf::LabelSelector
  • prf::ResSelector
• prf::SimplePredicate< prf::AtomDescriptor >
• prf_utils::StatBox
• UpdateProbs
• prf::Vector3

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PROFASI: Protein Folding and Aggregation Simulator, Version 1.1
© (2005-2008) Anders Irbäck and Sandipan Mohanty
Documentation generated on 10 Oct 2008 using Doxygen version 1.5.0