1 #ifndef theplu_yat_omic_bam_read_filter
2 #define theplu_yat_omic_bam_read_filter
25 #include "config_bam.h"
26 #include YAT_BAM_HEADER
62 BamReadFilter(
unsigned char mapQ,
unsigned int filtered_flags=BAM_DEF_MASK,
63 unsigned int required_flags=0);
73 unsigned int filtered_;
74 unsigned int required_;
bool operator()(const yat::omic::BamRead &bam) const
Class holding a bam query.
Definition: BamRead.h:53
Filter bam reads.
Definition: BamReadFilter.h:53
BamReadFilter(unsigned char mapQ, unsigned int filtered_flags=BAM_DEF_MASK, unsigned int required_flags=0)