algorithm.h

#ifndef theplu_yat_omic_algorithm
#define theplu_yat_omic_algorithm

// $Id: algorithm.h 3295 2014-07-25 04:24:39Z peter $

/*
  Copyright (C) 2012, 2013, 2014 Peter Johansson

  This file is part of the yat library, http://dev.thep.lu.se/yat

  The yat library is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License as
  published by the Free Software Foundation; either version 3 of the
  License, or (at your option) any later version.

  The yat library is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
  General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with this program. If not, see <http://www.gnu.org/licenses/>.
*/

#include "BamPairIterator.h"

namespace theplu {
namespace yat {
namespace omic {

  template<class Iterator, class Visitor>
  void bam_pair_analyse(Iterator first, Iterator last, Visitor& visitor)
  {
    BamPairIterator<Iterator> iter(first, last);
    BamPairIterator<Iterator> end(last, last);
    for (; iter!=end; ++iter)
      visitor((*iter).first(), (*iter).second());
  }

}}}
#endif