This is the yat interface to GSL vector. More...

#include <yat/utility/Vector.h>

Inheritance diagram for theplu::yat::utility::Vector:

Public Types
typedef double &	reference

typedef StrideIterator< double * >	iterator
	mutable iterator

typedef double	value_type

typedef const double &	const_reference

typedef StrideIterator< const double * >	const_iterator
	VectorBase::const_iterator.

Public Member Functions
	Vector (void)
	The default constructor.

	Vector (size_t n, double init_value=0)
	Allocates memory space for n elements, and sets all elements to init_value. More...

	Vector (const Vector &other)
	The copy constructor. More...

	Vector (const VectorBase &other)
	Copy a VectorBase. More...

	Vector (std::istream &, char sep='\0') throw (utility::IO_error, std::exception)
	The istream constructor. More...

	~Vector (void)

bool	isview (void) const

void	resize (size_t, double init_value=0)
	Resize Vector. More...

const Vector &	operator= (const Vector &)
	The assignment operator. More...

const Vector &	operator= (const VectorBase &)
	The assignment operator. More...

void	all (double value)

iterator	begin (void)

const_iterator	begin (void) const

void	div (const VectorBase &other)
	This function performs element-wise division, $this_i = this_i / other_i \; \forall i$ . More...

iterator	end (void)

const_iterator	end (void) const

gsl_vector *	gsl_vector_p (void)

const gsl_vector *	gsl_vector_p (void) const

void	mul (const VectorBase &other)
	This function performs element-wise multiplication, $this_i = this_i * other_i \; \forall i$ . More...

void	reverse (void)
	Reverse the order of elements in the VectorMutable.

void	swap (size_t i, size_t j)
	Exchange elements i and j.

double &	operator() (size_t i)
	Element access operator. More...

const double &	operator() (size_t i) const
	Element access operator. More...

const VectorMutable &	operator+= (const VectorBase &)
	Addition and assign operator. VectorBase addition, $this_i = this_i + other_i \; \forall i$ . More...

const VectorMutable &	operator+= (double d)
	Add a constant to a VectorBase, $this_i = this_i + d \; \forall i$ . More...

const VectorMutable &	operator-= (const VectorBase &)
	Subtract and assign operator. VectorBase subtraction, $this_i = this_i - other_i \; \forall i$ . More...

const VectorMutable &	operator-= (double d)
	Subtract a constant to a VectorBase, $this_i = this_i - d \; \forall i$ . More...

const VectorMutable &	operator*= (double d)
	Multiply with scalar and assign operator, $this_i = this_i * d \; \forall i$ . More...

bool	equal (const VectorBase &, const double precision=0) const
	Check whether VectorBases are equal within a user defined precision, set by precision. More...

size_t	size (void) const

bool	operator== (const VectorBase &) const
	Comparison operator. Takes linear time. More...

bool	operator!= (const VectorBase &) const
	Comparison operator. Takes linear time. More...

double	operator* (const VectorBase &) const

Protected Attributes
gsl_vector *	vec_

const gsl_vector *	const_vec_
	pointer to underlying GSL vector

Related Functions
(Note that these are not member functions.)
void	swap (Vector &, Vector &)
	Swap Vector elements by copying. More...

Vector	operator* (const VectorBase &, const Matrix &)
	Matrix Vector multiplication.

bool	isnull (const VectorBase &)
	Check if all elements of the VectorBase are zero. More...

double	max (const VectorBase &)
	Get the maximum value of the VectorBase. More...

size_t	max_index (const VectorBase &)
	Locate the maximum value in the VectorBase. More...

double	min (const VectorBase &)
	Get the minimum value of the VectorBase. More...

size_t	min_index (const VectorBase &)
	Locate the minimum value in the VectorBase. More...

bool	nan (const VectorBase &templat, Vector &flag)
	Create a VectorBase flag indicating NaN's in another VectorBase templat. More...

void	sort_index (std::vector< size_t > &sort_index, const VectorBase &invec)

void	sort_smallest_index (std::vector< size_t > &sort_index, size_t k, const VectorBase &invec)

void	sort_largest_index (std::vector< size_t > &sort_index, size_t k, const VectorBase &invec)

double	sum (const VectorBase &)
	Calculate the sum of all VectorBase elements. More...

std::ostream &	operator<< (std::ostream &s, const VectorBase &v)
	The output operator for the VectorBase class. More...

Detailed Description

This is the yat interface to GSL vector.

File streams:: Reading and writing vectors to file streams are of course supported. These are implemented without using GSL functionality, and thus binary read and write to streams are not supported.

Vector views: GSL vector views are supported in classes: VectorView and VectorConstView

Member Typedef Documentation

typedef const double& theplu::yat::utility::VectorBase::const_reference

inherited

const_reference type is const double&

Since: New in yat 0.5

typedef double& theplu::yat::utility::VectorMutable::reference

inherited

reference type is double&

Since: New in yat 0.5

typedef double theplu::yat::utility::VectorBase::value_type

inherited

value_type is double

Since: New in yat 0.5

Constructor & Destructor Documentation

theplu::yat::utility::Vector::Vector	(	size_t	n,
		double	init_value = `0`
	)

explicit

Allocates memory space for n elements, and sets all elements to init_value.

Exceptions

GSL_error if memory allocation fails.

theplu::yat::utility::Vector::Vector ( const Vector & other )

The copy constructor.

Exceptions

A	GSL_error is indirectly thrown if memory allocation fails.

theplu::yat::utility::Vector::Vector ( const VectorBase & other )

explicit

Copy a VectorBase.

Exceptions

A	GSL_error is indirectly thrown if memory allocation fails.

theplu::yat::utility::Vector::Vector	(	std::istream &	,
		char	sep = `'\0'`
	)
throw	(	utility::IO_error,
		std::exception
	)

explicit

The istream constructor.

Either elements should be separated with white space characters (default), or elements should be separated by the delimiter sep. When delimiter sep is used empty elements are stored as NaN's (except that empty lines are ignored). The end of input to the Vector is at end of file marker.

Exceptions

GSL_error if memory allocation fails, IO_error if unexpected input is found in the input stream.

theplu::yat::utility::Vector::~Vector ( void )

The destructor.

Member Function Documentation

void theplu::yat::utility::VectorMutable::all ( double value )

inherited

Set all elements to value.

const_iterator theplu::yat::utility::VectorBase::begin ( void ) const

inherited

Returns: read-only iterator to start of VectorBase

iterator theplu::yat::utility::VectorMutable::begin ( void )

inherited

Returns: mutable iterator to start of VectorMutable

void theplu::yat::utility::VectorMutable::div ( const VectorBase & other )

inherited

This function performs element-wise division, $this_i = this_i / other_i \; \forall i$ .

Exceptions

GSL_error if dimensions mis-match.

const_iterator theplu::yat::utility::VectorBase::end ( void ) const

inherited

Returns: read-only iterator to end of VectorBase

iterator theplu::yat::utility::VectorMutable::end ( void )

inherited

Returns: mutable iterator to end of VectorMutable

bool theplu::yat::utility::VectorBase::equal	(	const VectorBase &	,
		const double	precision = `0`
	)		const

inherited

Check whether VectorBases are equal within a user defined precision, set by precision.

Returns: True if each element deviates less or equal than d. If any VectorBase contain a NaN, false is always returned.

See Also: operator== and operator!=

const gsl_vector* theplu::yat::utility::VectorBase::gsl_vector_p ( void ) const

inherited

Returns: A const pointer to the internal GSL vector,

gsl_vector* theplu::yat::utility::VectorMutable::gsl_vector_p ( void )

inherited

Returns: A pointer to the internal GSL vector,

bool theplu::yat::utility::Vector::isview ( void ) const

virtual

Returns: false

Implements theplu::yat::utility::VectorMutable.

void theplu::yat::utility::VectorMutable::mul ( const VectorBase & other )

inherited

This function performs element-wise multiplication, $this_i = this_i * other_i \; \forall i$ .

Exceptions

GSL_error if dimensions mis-match.

bool theplu::yat::utility::VectorBase::operator!= ( const VectorBase & ) const

inherited

Comparison operator. Takes linear time.

Checks are performed with exact matching, i.e., rounding off effects may destroy comparison. Use the equal function for comparing elements within a user defined precision.

Returns: False if all elements are equal otherwise true.

See Also: equal(const VectorBase&, const double precision=0)

const double& theplu::yat::utility::VectorBase::operator() ( size_t i ) const

inherited

Element access operator.

Returns: Const reference to element i.

Exceptions

If	GSL range checks are enabled in the underlying GSL library a GSL_error exception is thrown if either index is out of range.

double& theplu::yat::utility::VectorMutable::operator() ( size_t i )

inherited

Element access operator.

Returns: Reference to element i.

Exceptions

If	GSL range checks are enabled in the underlying GSL library a GSL_error exception is thrown if either index is out of range.

double theplu::yat::utility::VectorBase::operator* ( const VectorBase & ) const

inherited

Returns: The dot product.

const VectorMutable& theplu::yat::utility::VectorMutable::operator*= ( double d )

inherited

Multiply with scalar and assign operator, $this_i = this_i * d \; \forall i$ .

Returns: A const reference to the resulting VectorBase.

const VectorMutable& theplu::yat::utility::VectorMutable::operator+= ( const VectorBase & )

inherited

Addition and assign operator. VectorBase addition, $this_i = this_i + other_i \; \forall i$ .

Returns: A const reference to the resulting VectorBase.

Exceptions

GSL_error if dimensions mis-match.

const VectorMutable& theplu::yat::utility::VectorMutable::operator+= ( double d )

inherited

Add a constant to a VectorBase, $this_i = this_i + d \; \forall i$ .

Returns: A const reference to the resulting VectorBase.

const VectorMutable& theplu::yat::utility::VectorMutable::operator-= ( const VectorBase & )

inherited

Subtract and assign operator. VectorBase subtraction, $this_i = this_i - other_i \; \forall i$ .

Returns: A const reference to the resulting VectorBase.

Exceptions

GSL_error if dimensions mis-match.

const VectorMutable& theplu::yat::utility::VectorMutable::operator-= ( double d )

inherited

Subtract a constant to a VectorBase, $this_i = this_i - d \; \forall i$ .

Returns: A const reference to the resulting VectorBase.

const Vector& theplu::yat::utility::Vector::operator= ( const Vector & )

The assignment operator.

Note: Invalidates views and iterators of Vector.

Returns: A const reference to the resulting Vector.

Exceptions

GSL_error if assignment fails.

const Vector& theplu::yat::utility::Vector::operator= ( const VectorBase & )

The assignment operator.

Note: Invalidates views and iterators of Vector.

Returns: A const reference to the resulting Vector.

Exceptions

GSL_error if assignment fails.

bool theplu::yat::utility::VectorBase::operator== ( const VectorBase & ) const

inherited

Comparison operator. Takes linear time.

Checks are performed with exact matching, i.e., rounding off effects may destroy comparison. Use the equal function for comparing elements within a user defined precision.

Returns: True if all elements are equal otherwise false.

See Also: equal(const VectorBase&, const double precision=0)

void theplu::yat::utility::Vector::resize	(	size_t	,
		double	init_value = `0`
	)

Resize Vector.

All elements are set to init_value.

Note: Underlying GSL vector is destroyed and a view or an iterator into this Vector becomes invalid.

Exceptions

GSL_error if memory allocation fails.

size_t theplu::yat::utility::VectorBase::size ( void ) const

inherited

Returns: number of elements in the VectorBase.

Friends And Related Function Documentation

bool isnull ( const VectorBase & )

Returns: True if all elements in the VectorBase is zero, false othwerwise.

double max ( const VectorBase & )

Returns: The maximum value of the VectorBase.

size_t max_index ( const VectorBase & )

Returns: The index to the maximum value of the VectorBase.

Note: Lower index has precedence.

double min ( const VectorBase & )

Returns: The minimum value of the VectorBase.

size_t min_index ( const VectorBase & )

Returns: The index to the minimum value of the VectorBase.

Note: Lower index has precedence.

bool nan	(	const VectorBase &	templat,
		Vector &	flag
	)

The flag VectorBase is changed to contain 1's and 0's only. A 1 means that the corresponding element in the templat VectorBase is valid and a zero means that the corresponding element is a NaN.

Note: Space for vector flag is reallocated to fit the size of VectorBase templat if sizes mismatch.

Returns: True if the templat VectorBase contains at least one NaN.

std::ostream & operator<<	(	std::ostream &	s,
		const VectorBase &	v
	)

Elements in VectorBase v are sent to ostream s and separated with the fill character of stream s, s.fill(). If you, for example, want to print the VectorBase v with the elements separated by a ':', you do so by:

s << setfill(':') << v;

void sort_index	(	std::vector< size_t > &	sort_index,
		const VectorBase &	invec
	)

Create a vector sort_index containing the indeces of elements in a another VectorBase invec. The elements of sort_index give the index of the VectorBase element which would have been stored in that position if the VectorBase had been sorted in place. The first element of sort_index gives the index of the least element in invec, and the last element of sort_index gives the index of the greatest element in invec . The VectorBase invec is not changed.

void sort_largest_index	(	std::vector< size_t > &	sort_index,
		size_t	k,
		const VectorBase &	invec
	)

void sort_smallest_index	(	std::vector< size_t > &	sort_index,
		size_t	k,
		const VectorBase &	invec
	)

double sum ( const VectorBase & )

Returns: The sum.

void swap	(	Vector &	,
		Vector &
	)

The two Vectors must have the same length.

Exceptions

GSL_error if Vector lengths differs.

Member Data Documentation

gsl_vector* theplu::yat::utility::VectorMutable::vec_

protectedinherited

pointer to underlying GSL vector. Should always point to same gsl_vector as const_vec_ in base class does. This pointer should by used for mutable operations. Do not use this in const functions; use const_vec_ inherited from BaseVector.

The documentation for this class was generated from the following file:

yat/utility/Vector.h

Public Types

Public Member Functions

Protected Attributes

Related Functions

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation

Member Data Documentation