theplu::yat::omic::InBamFile Member List

This is the complete list of members for theplu::yat::omic::InBamFile, including all inherited members.

BamFile(void)	theplu::yat::omic::BamFile< InBamFile >
build_index(void) const	theplu::yat::omic::InBamFile
build_index_base(void) const	theplu::yat::omic::BamFile< InBamFile >	protected
close(void)	theplu::yat::omic::BamFile< InBamFile >
filename(void) const	theplu::yat::omic::BamFile< InBamFile >	inlineprotected
have_index(void) const	theplu::yat::omic::BamFile< InBamFile >
header(void) const	theplu::yat::omic::InBamFile
InBamFile(void)	theplu::yat::omic::InBamFile
InBamFile(const std::string &fn)	theplu::yat::omic::InBamFile	explicit
index(void) const	theplu::yat::omic::InBamFile
index_type typedef	theplu::yat::omic::InBamFile
is_open(void) const	theplu::yat::omic::BamFile< InBamFile >
n_mapped(int tid) const	theplu::yat::omic::InBamFile
n_no_coordinate(void) const	theplu::yat::omic::InBamFile
n_unmapped(int tid) const	theplu::yat::omic::InBamFile
open(const std::string &fn)	theplu::yat::omic::InBamFile
open_base(const std::string &fn, const std::string &mode, const void *aux)	theplu::yat::omic::BamFile< InBamFile >	protected
open_base(const std::string &fn, const std::string &mode)	theplu::yat::omic::BamFile< InBamFile >	protected
read(BamRead &read)	theplu::yat::omic::InBamFile
read(BamRead &read, hts_itr_t *iter)	theplu::yat::omic::InBamFile
sf_	theplu::yat::omic::BamFile< InBamFile >	protected
~BamFile(void)	theplu::yat::omic::BamFile< InBamFile >	virtual
~InBamFile(void)	theplu::yat::omic::InBamFile	virtual