config/dist/extended-properties.xml

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4888 06 Apr 09 nicklas 1 <?xml version="1.0" encoding="UTF-8" ?>
2959 27 Nov 06 nicklas 2 <!DOCTYPE extended-properties SYSTEM "extended-properties.dtd" >
2959 27 Nov 06 nicklas 3 <!--
2959 27 Nov 06 nicklas 4   $Id$
2959 27 Nov 06 nicklas 5
3675 16 Aug 07 jari 6   Copyright (C) 2006 Nicklas Nordborg
3675 16 Aug 07 jari 7   Copyright (C) 2007 Nicklas Nordborg, Martin Svensson
2959 27 Nov 06 nicklas 8
2959 27 Nov 06 nicklas 9   This file is part of BASE - BioArray Software Environment.
2959 27 Nov 06 nicklas 10   Available at http://base.thep.lu.se/
2959 27 Nov 06 nicklas 11
2959 27 Nov 06 nicklas 12   BASE is free software; you can redistribute it and/or
2959 27 Nov 06 nicklas 13   modify it under the terms of the GNU General Public License
4474 05 Sep 08 jari 14   as published by the Free Software Foundation; either version 3
2959 27 Nov 06 nicklas 15   of the License, or (at your option) any later version.
2959 27 Nov 06 nicklas 16
2959 27 Nov 06 nicklas 17   BASE is distributed in the hope that it will be useful,
2959 27 Nov 06 nicklas 18   but WITHOUT ANY WARRANTY; without even the implied warranty of
2959 27 Nov 06 nicklas 19   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
2959 27 Nov 06 nicklas 20   GNU General Public License for more details.
2959 27 Nov 06 nicklas 21
2959 27 Nov 06 nicklas 22   You should have received a copy of the GNU General Public License
4508 11 Sep 08 jari 23   along with BASE. If not, see <http://www.gnu.org/licenses/>.
2959 27 Nov 06 nicklas 24 -->
2959 27 Nov 06 nicklas 25 <extended-properties>
2959 27 Nov 06 nicklas 26   <class name="ReporterData">
2959 27 Nov 06 nicklas 27     <property
2959 27 Nov 06 nicklas 28       name="species"
2959 27 Nov 06 nicklas 29       title="Species"
2959 27 Nov 06 nicklas 30       description="The organism from which the reporter is derived"
2959 27 Nov 06 nicklas 31       column="species"
2959 27 Nov 06 nicklas 32       type="string"
2959 27 Nov 06 nicklas 33       length="255"
2959 27 Nov 06 nicklas 34     />
2959 27 Nov 06 nicklas 35     <property
2959 27 Nov 06 nicklas 36       name="clusterId"
2959 27 Nov 06 nicklas 37       title="Cluster ID"
2959 27 Nov 06 nicklas 38       description="A unique identifier for a Unigene entry"
2959 27 Nov 06 nicklas 39       column="clusterId"
2959 27 Nov 06 nicklas 40       type="string"
2959 27 Nov 06 nicklas 41       length="255"
2959 27 Nov 06 nicklas 42       >
2959 27 Nov 06 nicklas 43       <link
2959 27 Nov 06 nicklas 44         regexp="\w+\.\d+"
6144 21 Sep 12 nicklas 45         url="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=unigene&amp;term={value}%5BClusterID%5D"
2959 27 Nov 06 nicklas 46       />
2959 27 Nov 06 nicklas 47     </property>
2959 27 Nov 06 nicklas 48     <property
2959 27 Nov 06 nicklas 49       name="length"
2959 27 Nov 06 nicklas 50       title="Length"
2959 27 Nov 06 nicklas 51       description="The length of the sequence"
2959 27 Nov 06 nicklas 52       column="length"
2959 27 Nov 06 nicklas 53       type="int"
2959 27 Nov 06 nicklas 54     />
2959 27 Nov 06 nicklas 55     <property
2959 27 Nov 06 nicklas 56       name="sequence"
2959 27 Nov 06 nicklas 57       title="Sequence"
2959 27 Nov 06 nicklas 58       description="The nucleotide sequence of the reporter"
2959 27 Nov 06 nicklas 59       column="sequence"
2959 27 Nov 06 nicklas 60       type="string"
2959 27 Nov 06 nicklas 61       length="65535"
2959 27 Nov 06 nicklas 62     />
2959 27 Nov 06 nicklas 63     <property
2959 27 Nov 06 nicklas 64       name="vector"
2959 27 Nov 06 nicklas 65       title="Vector"
2959 27 Nov 06 nicklas 66       description="The vector from which the reporter is derived"
2959 27 Nov 06 nicklas 67       column="vector"
2959 27 Nov 06 nicklas 68       type="string"
2959 27 Nov 06 nicklas 69       length="65535"
2959 27 Nov 06 nicklas 70     />
2959 27 Nov 06 nicklas 71     <property
2959 27 Nov 06 nicklas 72       name="tissue"
2959 27 Nov 06 nicklas 73       title="Tissue"
2959 27 Nov 06 nicklas 74       description="The tissue from which the reporter is derived"
2959 27 Nov 06 nicklas 75       column="tissue"
2959 27 Nov 06 nicklas 76       type="string"
2959 27 Nov 06 nicklas 77       length="65535"
2959 27 Nov 06 nicklas 78     />
2959 27 Nov 06 nicklas 79     <property
2959 27 Nov 06 nicklas 80       name="library"
2959 27 Nov 06 nicklas 81       title="Library"
2959 27 Nov 06 nicklas 82       description="The library from which the reporter is derived"
2959 27 Nov 06 nicklas 83       column="library"
2959 27 Nov 06 nicklas 84       type="string"
2959 27 Nov 06 nicklas 85       length="65535"
2959 27 Nov 06 nicklas 86     />
2959 27 Nov 06 nicklas 87     <property
2959 27 Nov 06 nicklas 88       name="accession"
2959 27 Nov 06 nicklas 89       title="Accession"
2959 27 Nov 06 nicklas 90       description=""
2959 27 Nov 06 nicklas 91       column="accession"
2959 27 Nov 06 nicklas 92       type="string"
2959 27 Nov 06 nicklas 93       length="255"
2959 27 Nov 06 nicklas 94     />
2959 27 Nov 06 nicklas 95     <property
2959 27 Nov 06 nicklas 96       name="nid"
2959 27 Nov 06 nicklas 97       title="NID"
2959 27 Nov 06 nicklas 98       description=""
2959 27 Nov 06 nicklas 99       column="nid"
2959 27 Nov 06 nicklas 100       type="string"
2959 27 Nov 06 nicklas 101       length="255"
2959 27 Nov 06 nicklas 102     />
2959 27 Nov 06 nicklas 103     <property
2959 27 Nov 06 nicklas 104       name="chromosome"
2959 27 Nov 06 nicklas 105       title="Chromosome"
2959 27 Nov 06 nicklas 106       description="The chromosome from which the reporter is derived"
2959 27 Nov 06 nicklas 107       column="chromosome"
2959 27 Nov 06 nicklas 108       type="string"
2959 27 Nov 06 nicklas 109       length="255"
2959 27 Nov 06 nicklas 110     />
2959 27 Nov 06 nicklas 111     <property
2959 27 Nov 06 nicklas 112       name="cytoband"
2959 27 Nov 06 nicklas 113       title="Cytoband"
2959 27 Nov 06 nicklas 114       description="The cytoband from which the reporter is derived"
2959 27 Nov 06 nicklas 115       column="cytoband"
2959 27 Nov 06 nicklas 116       type="string"
2959 27 Nov 06 nicklas 117       length="255"
2959 27 Nov 06 nicklas 118     />
2959 27 Nov 06 nicklas 119     <property
2959 27 Nov 06 nicklas 120       name="markers"
2959 27 Nov 06 nicklas 121       title="Markers"
2959 27 Nov 06 nicklas 122       description=""
2959 27 Nov 06 nicklas 123       column="markers"
2959 27 Nov 06 nicklas 124       type="string"
2959 27 Nov 06 nicklas 125       length="255"
2959 27 Nov 06 nicklas 126     />
2959 27 Nov 06 nicklas 127     <property
2959 27 Nov 06 nicklas 128       name="antibiotics"
2959 27 Nov 06 nicklas 129       title="Antibiotics"
2959 27 Nov 06 nicklas 130       description=""
2959 27 Nov 06 nicklas 131       column="antibiotics"
2959 27 Nov 06 nicklas 132       type="string"
2959 27 Nov 06 nicklas 133       length="255"
2959 27 Nov 06 nicklas 134     />
2959 27 Nov 06 nicklas 135     <property
2959 27 Nov 06 nicklas 136       name="locusLink"
2959 27 Nov 06 nicklas 137       title="LocusLink"
2959 27 Nov 06 nicklas 138       description=""
2959 27 Nov 06 nicklas 139       column="locuslink"
2959 27 Nov 06 nicklas 140       type="string"
2959 27 Nov 06 nicklas 141       length="255"
2959 27 Nov 06 nicklas 142       >
2959 27 Nov 06 nicklas 143       <link 
2959 27 Nov 06 nicklas 144         regexp="\d+" 
2959 27 Nov 06 nicklas 145         url="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene&amp;cmd=Retrieve&amp;dopt=Graphics&amp;list_uids={value}" 
2959 27 Nov 06 nicklas 146       />
2959 27 Nov 06 nicklas 147     </property>
2959 27 Nov 06 nicklas 148     <property
2959 27 Nov 06 nicklas 149       name="omim"
2959 27 Nov 06 nicklas 150       title="OMIM"
2959 27 Nov 06 nicklas 151       description=""
2959 27 Nov 06 nicklas 152       column="omim"
2959 27 Nov 06 nicklas 153       type="string"
2959 27 Nov 06 nicklas 154       length="255"
2959 27 Nov 06 nicklas 155       >
2959 27 Nov 06 nicklas 156       <link
2959 27 Nov 06 nicklas 157         regexp="\d+"
2959 27 Nov 06 nicklas 158         url="http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id={value}"
2959 27 Nov 06 nicklas 159       />
2959 27 Nov 06 nicklas 160     </property>
2959 27 Nov 06 nicklas 161   </class>
3535 28 Jun 07 martin 162     
3535 28 Jun 07 martin 163   <!-- Extended properties for Users -->
3535 28 Jun 07 martin 164   <class name="UserData">
3535 28 Jun 07 martin 165     <property
3535 28 Jun 07 martin 166       name="mobile"
3535 28 Jun 07 martin 167       title="Mobile"
3535 28 Jun 07 martin 168       description="The user's mobile number"
3535 28 Jun 07 martin 169       column="mobile"
3535 28 Jun 07 martin 170       type="string"
3535 28 Jun 07 martin 171       length="255"
3535 28 Jun 07 martin 172     />
3535 28 Jun 07 martin 173     <property
3535 28 Jun 07 martin 174       name="skype"
3535 28 Jun 07 martin 175       title="Skype"
3535 28 Jun 07 martin 176       description="The user's skype contact"
3535 28 Jun 07 martin 177       column="skype"
3535 28 Jun 07 martin 178       type="string"
3535 28 Jun 07 martin 179       length="255"
3611 31 Jul 07 nicklas 180       >
3611 31 Jul 07 nicklas 181       <link
3611 31 Jul 07 nicklas 182         regexp=".+"
3611 31 Jul 07 nicklas 183         url="callto://{value}"
3611 31 Jul 07 nicklas 184       />
3611 31 Jul 07 nicklas 185     </property>
3535 28 Jun 07 martin 186   </class>
2959 27 Nov 06 nicklas 187 </extended-properties>
2959 27 Nov 06 nicklas 188

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