mev-4.0.01/source/org/tigr/microarray/mev/cgh/CGHDataObj/Cluster/Experiment/BacClonesExperimentParameters.java

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2 26 Feb 07 jari 1 /*
2 26 Feb 07 jari 2  * BacClonesExperimentParameters.java
2 26 Feb 07 jari 3  *
2 26 Feb 07 jari 4  * Created on June 2, 2003, 1:19 PM
2 26 Feb 07 jari 5  */
2 26 Feb 07 jari 6
2 26 Feb 07 jari 7 package org.tigr.microarray.mev.cgh.CGHDataObj.Cluster.Experiment;
2 26 Feb 07 jari 8
2 26 Feb 07 jari 9 /**
2 26 Feb 07 jari 10  *
2 26 Feb 07 jari 11  * @author  Adam Margolin
2 26 Feb 07 jari 12  * @author Raktim Sinha
2 26 Feb 07 jari 13  */
2 26 Feb 07 jari 14
2 26 Feb 07 jari 15 public class BacClonesExperimentParameters {
2 26 Feb 07 jari 16     public static final int ALL_CHROMOSOMES = -1;
2 26 Feb 07 jari 17
2 26 Feb 07 jari 18     int[] chromosomeIndices;
2 26 Feb 07 jari 19     boolean includeMissingBacs;
2 26 Feb 07 jari 20
2 26 Feb 07 jari 21     /** Creates a new instance of BacClonesExperimentParameters */
2 26 Feb 07 jari 22     public BacClonesExperimentParameters() {
2 26 Feb 07 jari 23     }
2 26 Feb 07 jari 24
2 26 Feb 07 jari 25     /** Getter for property chromosomeIndices.
2 26 Feb 07 jari 26      * @return Value of property chromosomeIndices.
2 26 Feb 07 jari 27      */
2 26 Feb 07 jari 28     public int[] getChromosomeIndices() {
2 26 Feb 07 jari 29         return this.chromosomeIndices;
2 26 Feb 07 jari 30     }
2 26 Feb 07 jari 31
2 26 Feb 07 jari 32     /** Setter for property chromosomeIndices.
2 26 Feb 07 jari 33      * @param chromosomeIndices New value of property chromosomeIndices.
2 26 Feb 07 jari 34      */
2 26 Feb 07 jari 35     public void setChromosomeIndices(int[] chromosomeIndices) {
2 26 Feb 07 jari 36         this.chromosomeIndices = chromosomeIndices;
2 26 Feb 07 jari 37     }
2 26 Feb 07 jari 38
2 26 Feb 07 jari 39     /** Getter for property includeMissingBacs.
2 26 Feb 07 jari 40      * @return Value of property includeMissingBacs.
2 26 Feb 07 jari 41      */
2 26 Feb 07 jari 42     public boolean isIncludeMissingBacs() {
2 26 Feb 07 jari 43         return includeMissingBacs;
2 26 Feb 07 jari 44     }
2 26 Feb 07 jari 45
2 26 Feb 07 jari 46     /** Setter for property includeMissingBacs.
2 26 Feb 07 jari 47      * @param includeMissingBacs New value of property includeMissingBacs.
2 26 Feb 07 jari 48      */
2 26 Feb 07 jari 49     public void setIncludeMissingBacs(boolean includeMissingBacs) {
2 26 Feb 07 jari 50         this.includeMissingBacs = includeMissingBacs;
2 26 Feb 07 jari 51     }
2 26 Feb 07 jari 52
2 26 Feb 07 jari 53 }

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