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<html> |
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<body bgcolor = "#FFFFCC"><basefont face = "Arial"> |
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<h1>Newick File Output</h1> <h2>Parameter Information</h2> |
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<hr size = 10> |
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<h2>Newick Format</h2> |
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The Newick format file is a text based file format for representing tree |
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hierarchies. Nodes are represented by nested parentheses. |
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A complete description of the format can be found on the web by |
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searching on 'newick file format'. |
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<br><br> |
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The following site provides a good description (1/7/2005): |
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<br> |
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http://evolution.genetics.washington.edu/phylip/newicktree.html |
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<h2> Leaf Node Labels (Sample or Gene Labels) </h2> |
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This drop down menu allows selection of the annotation type to use to label leaf |
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nodes in the tree. The keys listed correspond to the loaded annotation types |
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for genes or samples. |
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<br> |
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<h2>Output File Selection</h2> |
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The full path and file name can be entered in the text box in this area. The Select |
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Output File button provides a file browser and will update this field. |
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<br> |
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</basefont> |
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</body> |
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</html> |
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