extensions/net.sf.basedb.reggie/trunk/containers/genotyping_build.sh

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6680 20 Apr 22 nicklas 1 #!/bin/bash
6680 20 Apr 22 nicklas 2
6680 20 Apr 22 nicklas 3 PIPELINE_NAME=genotyping
6680 20 Apr 22 nicklas 4 PIPELINE_VERSION=1
6680 20 Apr 22 nicklas 5 PIPELINE_SUFFIX=gatk4.1.8.1
6680 20 Apr 22 nicklas 6
6680 20 Apr 22 nicklas 7 sudo singularity build sif/${PIPELINE_NAME}-v${PIPELINE_VERSION}-${PIPELINE_SUFFIX}.sif def/${PIPELINE_NAME}.def