extensions/net.sf.basedb.reggie/trunk/containers/hisat_build.sh

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6677 14 Apr 22 nicklas 1 #!/bin/bash
6677 14 Apr 22 nicklas 2
6677 14 Apr 22 nicklas 3 PIPELINE_NAME=hisat
6677 14 Apr 22 nicklas 4 PIPELINE_VERSION=5
6677 14 Apr 22 nicklas 5 PIPELINE_SUFFIX=hisat2.2.1_bowtie2.2.8
6677 14 Apr 22 nicklas 6
6677 14 Apr 22 nicklas 7 sudo singularity build sif/${PIPELINE_NAME}-v${PIPELINE_VERSION}-${PIPELINE_SUFFIX}.sif def/${PIPELINE_NAME}.def