extensions/net.sf.basedb.reggie/trunk/containers/wgs_variantcall_build.sh

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7386 30 Oct 23 nicklas 1 #!/bin/bash
7386 30 Oct 23 nicklas 2
7386 30 Oct 23 nicklas 3 PIPELINE_NAME=wgs-variantcall
7386 30 Oct 23 nicklas 4 PIPELINE_VERSION=1
7386 30 Oct 23 nicklas 5 PIPELINE_SUFFIX=gatk.4.4
7386 30 Oct 23 nicklas 6
7386 30 Oct 23 nicklas 7 sudo singularity build sif/${PIPELINE_NAME}-v${PIPELINE_VERSION}-${PIPELINE_SUFFIX}.sif def/${PIPELINE_NAME}.def