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22 Nov 05 |
enell |
#!/bin/bash - |
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18 Sep 08 |
jari |
2 |
# |
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18 Sep 08 |
jari |
# $Id$ |
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18 Sep 08 |
jari |
4 |
# |
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18 Sep 08 |
jari |
# Copyright (C) 2005 Johan Enell |
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18 Sep 08 |
jari |
# Copyright (C) 2008 Jari Häkkinen |
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18 Sep 08 |
jari |
7 |
# |
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18 Sep 08 |
jari |
# This file is part of the se.lu.onk.MergeBioAssay plug-in for |
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18 Sep 08 |
jari |
# BASE. Available at http://baseplugins.thep.lu.se/ and BASE web site |
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18 Sep 08 |
jari |
# is http://base.thep.lu.se |
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18 Sep 08 |
jari |
11 |
# |
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18 Sep 08 |
jari |
# This is free software; you can redistribute it and/or modify it |
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18 Sep 08 |
jari |
# under the terms of the GNU General Public License as published by |
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18 Sep 08 |
jari |
# the Free Software Foundation; either version 3 of the License, or |
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18 Sep 08 |
jari |
# (at your option) any later version. |
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18 Sep 08 |
jari |
16 |
# |
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18 Sep 08 |
jari |
# The software is distributed in the hope that it will be useful, but |
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18 Sep 08 |
jari |
# WITHOUT ANY WARRANTY; without even the implied warranty of |
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18 Sep 08 |
jari |
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
784 |
18 Sep 08 |
jari |
# General Public License for more details. |
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18 Sep 08 |
jari |
21 |
# |
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18 Sep 08 |
jari |
# You should have received a copy of the GNU General Public License |
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18 Sep 08 |
jari |
# along with BASE. If not, see <http://www.gnu.org/licenses/>. |
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18 Sep 08 |
jari |
24 |
# |
46 |
22 Nov 05 |
enell |
25 |
|
46 |
22 Nov 05 |
enell |
progdir="`dirname \"$0\"`" |
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16 Sep 08 |
jari |
27 |
|
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16 Sep 08 |
jari |
java -Xmx512M -cp "$CLASSPATH:$progdir/BaseFile/BaseFile.jar:$progdir/ReplicateError.jar" replicateerror.ReplicateError -wa |
52 |
25 Nov 05 |
enell |
R --no-save --slave < plot.R > R.out |
766 |
16 Sep 08 |
jari |
cp $progdir/WAindex.html index.html |
46 |
22 Nov 05 |
enell |
cp $progdir/base.css data/ |
766 |
16 Sep 08 |
jari |
cp $progdir/WAtabs.html data/tabs.html |
46 |
22 Nov 05 |
enell |
rm -f data/*.data |