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<?xml version="1.0" encoding="UTF-8" ?> |
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<!DOCTYPE raw-data-types SYSTEM "raw-data-types.dtd" > |
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<!-- |
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Definition for raw data types needed by the Illumina plug-ins. |
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nicklas |
Place this file in the WEB-INF/classes/raw-data-types directory. |
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For detailed installation instructions see the README file. |
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--> |
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<raw-data-types> |
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<raw-data-type |
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id="illumina_bead_summary" |
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channels="1" |
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name="Illumina Bead Summary (IBS)" |
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martin |
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table="IlluminaBeadSummary" |
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> |
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<property |
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name="n" |
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title="N" |
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description="Number of beads" |
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column="n" |
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type="int" |
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21 |
averagemethod="none" |
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/> |
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<property |
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name="mean" |
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title="Mean GRN" |
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description="Mean bead intensity" |
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column="mean" |
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type="float" |
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averagemethod="arithmetic_mean" |
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/> |
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<property |
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name="dev" |
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title="Dev GRN" |
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description="Standard deviation of intensities" |
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column="dev" |
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type="float" |
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averagemethod="none" |
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/> |
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<intensity-formula |
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name="mean" |
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title="Mean signal" |
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description="Mean bead intensity." |
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> |
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<formula |
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channel="1" |
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expression="raw('mean')" |
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/> |
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</intensity-formula> |
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</raw-data-type> |
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</raw-data-types> |
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