scripts - svndigest

baseplugins/extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/grid/scripts

Node	Lines	Code	Comments	Other	Revision	Author
../
alignment_statistics.sh	54	25	18	11	6640	nicklas
allele_counter.R	46	0	38	8	7278	nicklas
ascat.sh	99	57	25	17	7341	nicklas
beta_values.R	175	0	127	48	6886	nicklas
bwa-mem2.sh	243	157	45	41	7183	nicklas
check-illumina-directory.sh	16	13	1	2	6678	nicklas
demux-utils.sh	177	117	45	15	6955	nicklas
fix_cufflinks_tracking_id.sh	24	1	14	9	6675	nicklas
gc_stat.py	88	0	67	21	6656	nicklas
get_run_parameters.sh	47	31	10	6	6665	nicklas
hisat.sh	147	98	29	20	6676	nicklas
hisat2023.sh	148	99	29	20	6814	nicklas
hiseq_status.sh	87	35	38	14	6663	nicklas
import-fastq.sh	90	55	21	14	6669	nicklas
legacy.sh	147	95	32	20	6675	nicklas
mbaf.sh	61	33	17	11	6669	nicklas
methylation-beta.sh	70	36	18	16	6875	nicklas
mutation_signature.R	143	0	110	33	6656	nicklas
nextseq_status.sh	67	26	31	10	6663	nicklas
novaseq_status.sh	91	39	38	14	6663	nicklas
readlength_averager.awk	21	0	12	9	6649	nicklas
reggie-utils.sh	125	81	30	14	7106	nicklas
rnaseq-demux.sh	158	96	36	26	6669	nicklas
run_ascat.R	69	0	53	16	7421	nicklas
singlecolumnaverager.awk	31	0	22	9	6640	nicklas
stderrwrap.sh	37	13	15	9	6656	nicklas
stdwrap.sh	37	13	15	9	6630	nicklas
stringtie.sh	77	46	19	12	6669	nicklas
stringtie2023.sh	77	46	19	12	6820	nicklas
targeted-genotyping.sh	124	74	31	19	6669	nicklas
variantcall-utils.sh	140	87	41	12	6665	nicklas
variantcall.sh	172	107	44	21	6669	nicklas
wgs_paired_vcall.sh	373	271	45	57	7439	nicklas
wgs_pon_build.sh	117	78	14	25	7415	nicklas
wgs_pon_vcall.sh	149	98	23	28	7415	nicklas
Total	3727	1927	1172	628	7439	nicklas

Author	Lines	Code	Comments	Other	Revision	Date
nicklas	3727	1927	1172	628	7439	2023-11-16 12:27
Total	3727	1927	1172	628	7439	2023-11-16 12:27