../ |
AlignedWriter.java |
75 (100%) |
59 (100%) |
2 (100%) |
14 (100%) |
5320 |
nicklas |
BaseFileOutputLocation.java |
104 (100%) |
77 (100%) |
6 (100%) |
21 (100%) |
5117 |
nicklas |
BloodDnaWriter.java |
81 (100%) |
59 (100%) |
3 (100%) |
19 (100%) |
5320 |
nicklas |
BloodWriter.java |
72 (100%) |
52 (100%) |
3 (100%) |
17 (100%) |
5320 |
nicklas |
CaseWriter.java |
92 (100%) |
69 (100%) |
3 (100%) |
20 (100%) |
6099 |
nicklas |
CohortAnnotationType.java |
113 (100%) |
87 (100%) |
5 (100%) |
21 (100%) |
5320 |
nicklas |
CohortDataFileType.java |
95 (100%) |
65 (100%) |
8 (100%) |
22 (100%) |
7016 |
nicklas |
CohortItem.java |
942 (100%) |
603 (100%) |
172 (100%) |
167 (100%) |
7034 |
nicklas |
CohortTypeDef.java |
42 (100%) |
7 (100%) |
17 (100%) |
18 (100%) |
4408 |
nicklas |
CohortTypeDefFactory.java |
115 (100%) |
89 (100%) |
4 (100%) |
22 (100%) |
7016 |
nicklas |
CohortWriter.java |
146 (100%) |
64 (100%) |
39 (100%) |
43 (100%) |
7022 |
nicklas |
CufflinksWriter.java |
169 (100%) |
130 (100%) |
9 (100%) |
30 (100%) |
7014 |
nicklas |
DnaWriter.java |
103 (100%) |
79 (100%) |
3 (100%) |
21 (100%) |
6220 |
nicklas |
FileListFilter.java |
53 (100%) |
28 (100%) |
9 (100%) |
16 (100%) |
6389 |
nicklas |
FileLocationFilter.java |
38 (100%) |
20 (100%) |
7 (100%) |
11 (100%) |
4432 |
nicklas |
FileServerOutputLocation.java |
176 (100%) |
117 (100%) |
28 (100%) |
31 (100%) |
6963 |
nicklas |
FlowThroughWriter.java |
95 (100%) |
71 (100%) |
3 (100%) |
21 (100%) |
5320 |
nicklas |
IncaWriter.java |
169 (100%) |
133 (100%) |
11 (100%) |
25 (100%) |
7022 |
nicklas |
JsonWriter.java |
290 (100%) |
216 (100%) |
25 (100%) |
49 (100%) |
7035 |
nicklas |
LibraryWriter.java |
182 (100%) |
143 (100%) |
4 (100%) |
35 (100%) |
7286 |
nicklas |
LysateWriter.java |
109 (100%) |
83 (100%) |
3 (100%) |
23 (100%) |
5320 |
nicklas |
MergedWriter.java |
299 (100%) |
215 (100%) |
24 (100%) |
60 (100%) |
6424 |
nicklas |
MethylationWriter.java |
143 (100%) |
117 (100%) |
3 (100%) |
23 (100%) |
7020 |
nicklas |
NoSpecimenWriter.java |
108 (100%) |
80 (100%) |
3 (100%) |
25 (100%) |
5973 |
nicklas |
NoWriter.java |
44 (100%) |
32 (100%) |
2 (100%) |
10 (100%) |
5320 |
nicklas |
NotAskedWriter.java |
42 (100%) |
30 (100%) |
2 (100%) |
10 (100%) |
5320 |
nicklas |
OncoarrayWriter.java |
162 (100%) |
129 (100%) |
5 (100%) |
28 (100%) |
7018 |
nicklas |
OutputLocation.java |
136 (100%) |
60 (100%) |
34 (100%) |
42 (100%) |
6962 |
nicklas |
PatientWriter.java |
64 (100%) |
46 (100%) |
2 (100%) |
16 (100%) |
5320 |
nicklas |
QueryManager.java |
784 (100%) |
535 (100%) |
137 (100%) |
112 (100%) |
7007 |
nicklas |
README |
30 (100%) |
0 |
22 (100%) |
8 (100%) |
5875 |
nicklas |
RawBioAssayWriter.java |
47 (100%) |
34 (100%) |
2 (100%) |
11 (100%) |
5875 |
nicklas |
RegexpFileFilter.java |
34 (100%) |
18 (100%) |
4 (100%) |
12 (100%) |
6389 |
nicklas |
ReleaseExporter.java |
395 (100%) |
258 (100%) |
63 (100%) |
74 (100%) |
7071 |
nicklas |
ReleaseExporterPlugin.java |
577 (100%) |
473 (100%) |
19 (100%) |
85 (100%) |
6962 |
nicklas |
ReleaseWriterOptions.java |
101 (100%) |
54 (100%) |
16 (100%) |
31 (100%) |
5555 |
nicklas |
RetractWriter.java |
42 (100%) |
30 (100%) |
2 (100%) |
10 (100%) |
5320 |
nicklas |
RnaWriter.java |
113 (100%) |
88 (100%) |
4 (100%) |
21 (100%) |
6220 |
nicklas |
ScriptWriter.java |
330 (100%) |
242 (100%) |
39 (100%) |
49 (100%) |
7022 |
nicklas |
SpecimenWriter.java |
270 (100%) |
207 (100%) |
22 (100%) |
41 (100%) |
5973 |
nicklas |
StringTieWriter.java |
174 (100%) |
133 (100%) |
10 (100%) |
31 (100%) |
7014 |
nicklas |
VariantCallingWriter.java |
174 (100%) |
137 (100%) |
8 (100%) |
29 (100%) |
7014 |
nicklas |
mkdirs-template.sh |
39 (100%) |
21 (100%) |
9 (100%) |
9 (100%) |
5248 |
nicklas |
mklinks-template.sh |
42 (100%) |
21 (100%) |
12 (100%) |
9 (100%) |
5248 |
nicklas |
rsync-template.sh |
34 (100%) |
15 (100%) |
10 (100%) |
9 (100%) |
5248 |
nicklas |
Total |
7445 (100%) |
5226 (100%) |
818 (100%) |
1401 (100%) |
7286 |
nicklas |