| ../ |
| expression |
494 (100%) |
249 (100%) |
105 (100%) |
140 (100%) |
3999 |
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| multivariable |
135 (100%) |
61 (100%) |
39 (100%) |
35 (100%) |
4252 |
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| ranking |
1420 (100%) |
844 (100%) |
251 (100%) |
325 (100%) |
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| univariable |
113 (100%) |
45 (100%) |
39 (100%) |
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| Aligner.cc |
448 (100%) |
324 (100%) |
30 (100%) |
94 (100%) |
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| Aligner.h |
512 (99%) |
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203 (100%) |
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| Alignment.cc |
205 (74%) |
171 (81%) |
22 (52%) |
12 (50%) |
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| Alignment.h |
138 (69%) |
25 (55%) |
92 (79%) |
21 (53%) |
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| BFGS.cc |
52 (100%) |
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| BFGS.h |
61 (100%) |
13 (100%) |
27 (100%) |
21 (100%) |
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| BFGS2.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
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| BFGS2.h |
61 (100%) |
13 (100%) |
27 (100%) |
21 (100%) |
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| BLAS_level1.h |
219 (100%) |
113 (100%) |
34 (100%) |
72 (100%) |
3678 |
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| BLAS_level2.h |
158 (100%) |
77 (100%) |
36 (100%) |
45 (100%) |
4252 |
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| BLAS_level3.h |
544 (100%) |
340 (100%) |
67 (100%) |
137 (100%) |
3908 |
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| BLAS_utility.h |
36 (100%) |
11 (100%) |
13 (100%) |
12 (100%) |
3605 |
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| BasicMatrix.cc |
177 (100%) |
106 (100%) |
32 (100%) |
39 (100%) |
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| BasicMatrix.h |
127 (100%) |
37 (100%) |
44 (100%) |
46 (100%) |
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| BasicQueue.h |
343 (100%) |
167 (100%) |
80 (100%) |
96 (100%) |
4346 |
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| BasicVector.h |
77 (100%) |
21 (100%) |
26 (100%) |
30 (100%) |
3605 |
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| BinaryIstreamIterator.h |
97 (100%) |
41 (100%) |
26 (100%) |
30 (100%) |
3902 |
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| BinaryOstreamIterator.h |
81 (100%) |
34 (100%) |
25 (100%) |
22 (100%) |
4359 |
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| Bisection.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| Bisection.h |
44 (100%) |
13 (100%) |
16 (100%) |
15 (100%) |
4252 |
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| Brent.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| Brent.h |
44 (100%) |
13 (100%) |
16 (100%) |
15 (100%) |
4252 |
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| BrentMinimizer.cc |
54 (100%) |
13 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| BrentMinimizer.h |
49 (100%) |
17 (100%) |
17 (100%) |
15 (100%) |
4252 |
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| CholeskyDecomposer.cc |
86 (100%) |
47 (100%) |
14 (100%) |
25 (100%) |
4280 |
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| CholeskyDecomposer.h |
81 (100%) |
22 (100%) |
27 (100%) |
32 (100%) |
4280 |
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| Cigar.cc |
85 (100%) |
45 (100%) |
20 (100%) |
20 (100%) |
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| Cigar.h |
127 (100%) |
44 (100%) |
59 (100%) |
24 (100%) |
4359 |
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| CigarIterator.h |
178 (100%) |
91 (100%) |
41 (100%) |
46 (100%) |
3792 |
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| ColumnStream.cc |
208 (98%) |
141 (100%) |
32 (88%) |
35 (100%) |
4359 |
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| ColumnStream.h |
139 (97%) |
43 (100%) |
45 (91%) |
51 (100%) |
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| CommandLine.cc |
467 (98%) |
370 (99%) |
35 (87%) |
62 (100%) |
4359 |
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| CommandLine.h |
310 (93%) |
71 (100%) |
154 (88%) |
85 (98%) |
4359 |
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| Container2DIterator.h |
711 (99%) |
409 (100%) |
124 (96%) |
178 (100%) |
4359 |
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| DataIterator.h |
175 (98%) |
74 (100%) |
55 (96%) |
46 (100%) |
4359 |
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| DataWeight.cc |
118 (98%) |
62 (100%) |
23 (92%) |
33 (100%) |
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| DataWeight.h |
183 (98%) |
37 (100%) |
70 (97%) |
76 (100%) |
4359 |
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| DataWeightProxy.h |
174 (100%) |
86 (100%) |
55 (100%) |
33 (100%) |
4254 |
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| Deleter.cc |
39 (100%) |
12 (100%) |
13 (100%) |
14 (100%) |
2881 |
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| Deleter.h |
76 (100%) |
22 (100%) |
27 (100%) |
27 (100%) |
4089 |
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| DiagonalMatrix.cc |
199 (100%) |
141 (100%) |
16 (100%) |
42 (100%) |
4207 |
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| DiagonalMatrix.h |
478 (100%) |
246 (100%) |
76 (100%) |
156 (100%) |
4207 |
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| Exception.cc |
89 (100%) |
45 (100%) |
18 (100%) |
26 (100%) |
4359 |
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| Exception.h |
100 (45%) |
32 (44%) |
31 (41%) |
37 (51%) |
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| FalsePosition.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
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| FalsePosition.h |
44 (100%) |
13 (100%) |
16 (100%) |
15 (100%) |
4252 |
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| FileUtil.cc |
96 (43%) |
73 (50%) |
12 (28%) |
11 (33%) |
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| FileUtil.h |
60 (27%) |
10 (21%) |
33 (29%) |
17 (27%) |
4359 |
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| FletcherReevesConjugate.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| FletcherReevesConjugate.h |
61 (100%) |
13 (100%) |
27 (100%) |
21 (100%) |
4346 |
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| GetlineIterator.cc |
85 (100%) |
40 (100%) |
18 (100%) |
27 (100%) |
4359 |
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| GetlineIterator.h |
104 (100%) |
30 (100%) |
42 (100%) |
32 (100%) |
3210 |
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| GoldenSection.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
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| GoldenSection.h |
45 (100%) |
13 (100%) |
17 (100%) |
15 (100%) |
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| Index.cc |
120 (98%) |
64 (100%) |
21 (91%) |
35 (100%) |
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| Index.h |
151 (98%) |
33 (100%) |
52 (96%) |
66 (100%) |
4359 |
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| KernelMatrix.h |
192 (100%) |
53 (100%) |
67 (100%) |
72 (100%) |
3190 |
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| KernelPCA.cc |
108 (100%) |
52 (100%) |
25 (100%) |
31 (100%) |
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| KernelPCA.h |
104 (100%) |
27 (100%) |
42 (100%) |
35 (100%) |
4359 |
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| Makefile |
21 (100%) |
2 (100%) |
13 (100%) |
6 (100%) |
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| Makefile.am |
429 (88%) |
393 (94%) |
23 (46%) |
13 (65%) |
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| Matrix.cc |
771 (39%) |
625 (39%) |
44 (40%) |
102 (37%) |
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| Matrix.h |
831 (39%) |
252 (47%) |
302 (34%) |
277 (37%) |
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| MatrixBase.cc |
675 (36%) |
567 (37%) |
35 (34%) |
73 (30%) |
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| MatrixBase.h |
748 (36%) |
239 (46%) |
270 (32%) |
239 (34%) |
4359 |
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| MatrixConstView.cc |
127 (100%) |
80 (100%) |
13 (100%) |
34 (100%) |
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| MatrixConstView.h |
103 (100%) |
30 (100%) |
30 (100%) |
43 (100%) |
4141 |
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| MatrixExpression.h |
213 (100%) |
98 (100%) |
41 (100%) |
74 (100%) |
3938 |
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| MatrixMutable.cc |
771 (39%) |
643 (40%) |
35 (34%) |
93 (35%) |
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| MatrixMutable.h |
827 (38%) |
278 (50%) |
284 (33%) |
265 (36%) |
4359 |
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| MatrixView.cc |
173 (100%) |
111 (100%) |
13 (100%) |
49 (100%) |
4141 |
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| MatrixView.h |
177 (100%) |
46 (100%) |
59 (100%) |
72 (100%) |
4141 |
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| MatrixWeighted.cc |
296 (99%) |
217 (100%) |
16 (88%) |
63 (100%) |
4207 |
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| MatrixWeighted.h |
172 (93%) |
64 (100%) |
62 (86%) |
46 (97%) |
4207 |
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| MergeIterator.h |
218 (100%) |
106 (100%) |
58 (100%) |
54 (100%) |
3792 |
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| Minimizer.cc |
84 (100%) |
46 (100%) |
13 (100%) |
25 (100%) |
4252 |
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| Minimizer.h |
245 (100%) |
118 (100%) |
64 (100%) |
63 (100%) |
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| MultiMinimizer.cc |
80 (100%) |
42 (100%) |
13 (100%) |
25 (100%) |
4338 |
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| MultiMinimizer.h |
220 (100%) |
106 (100%) |
57 (100%) |
57 (100%) |
4338 |
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| MultiMinimizerDerivative.cc |
105 (100%) |
48 (100%) |
24 (100%) |
33 (100%) |
4346 |
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| MultiMinimizerDerivative.h |
269 (100%) |
127 (100%) |
72 (100%) |
70 (100%) |
4346 |
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| NNI.cc |
37 (20%) |
22 (22%) |
12 (21%) |
3 (11%) |
4359 |
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| NNI.h |
75 (27%) |
30 (32%) |
26 (22%) |
19 (27%) |
4359 |
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| NeedlemanWunsch.cc |
83 (100%) |
51 (100%) |
13 (100%) |
19 (100%) |
4334 |
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| NeedlemanWunsch.h |
148 (100%) |
52 (100%) |
50 (100%) |
46 (100%) |
4334 |
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| NelderMeadSimplex.cc |
37 (100%) |
11 (100%) |
13 (100%) |
13 (100%) |
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| NelderMeadSimplex.h |
46 (100%) |
13 (100%) |
16 (100%) |
17 (100%) |
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| NelderMeadSimplex2.cc |
37 (100%) |
11 (100%) |
13 (100%) |
13 (100%) |
4172 |
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| NelderMeadSimplex2.h |
46 (100%) |
13 (100%) |
16 (100%) |
17 (100%) |
4172 |
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| NelderMeadSimplex2Rand.cc |
37 (100%) |
11 (100%) |
13 (100%) |
13 (100%) |
4172 |
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| NelderMeadSimplex2Rand.h |
46 (100%) |
13 (100%) |
16 (100%) |
17 (100%) |
4172 |
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| Newton.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| Newton.h |
44 (100%) |
13 (100%) |
16 (100%) |
15 (100%) |
4252 |
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| Option.cc |
192 (97%) |
121 (100%) |
26 (83%) |
45 (100%) |
4359 |
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| Option.h |
189 (97%) |
52 (100%) |
59 (92%) |
78 (100%) |
4359 |
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| OptionArg.h |
281 (98%) |
165 (100%) |
67 (93%) |
49 (100%) |
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| OptionFile.cc |
156 (95%) |
109 (98%) |
28 (82%) |
19 (100%) |
4359 |
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| OptionFile.h |
107 (95%) |
27 (100%) |
51 (91%) |
29 (100%) |
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| OptionHelp.cc |
99 (96%) |
52 (100%) |
26 (86%) |
21 (100%) |
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| OptionHelp.h |
120 (96%) |
28 (100%) |
52 (91%) |
40 (100%) |
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| OptionInFile.cc |
73 (97%) |
32 (100%) |
22 (91%) |
19 (100%) |
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| OptionInFile.h |
92 (97%) |
26 (100%) |
36 (94%) |
30 (100%) |
4359 |
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| OptionOutFile.cc |
72 (97%) |
32 (100%) |
21 (91%) |
19 (100%) |
4359 |
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| OptionOutFile.h |
95 (97%) |
27 (100%) |
38 (95%) |
30 (100%) |
4359 |
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| OptionSwitch.cc |
107 (96%) |
58 (100%) |
24 (85%) |
25 (100%) |
4359 |
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| OptionSwitch.h |
103 (96%) |
33 (100%) |
33 (89%) |
37 (100%) |
4359 |
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| OptionVersion.cc |
136 (100%) |
94 (100%) |
13 (100%) |
29 (100%) |
4183 |
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| OptionVersion.h |
120 (100%) |
42 (100%) |
49 (100%) |
29 (100%) |
4183 |
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| OstreamIterator.h |
139 (100%) |
49 (100%) |
57 (100%) |
33 (100%) |
4359 |
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| PCA.cc |
232 (24%) |
179 (26%) |
27 (19%) |
26 (20%) |
4373 |
peter |
| PCA.h |
136 (32%) |
50 (32%) |
64 (38%) |
22 (22%) |
4373 |
peter |
| PolakRibiereConjugate.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| PolakRibiereConjugate.h |
61 (100%) |
13 (100%) |
27 (100%) |
21 (100%) |
4346 |
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| PriorityQueue.h |
290 (100%) |
134 (100%) |
78 (100%) |
78 (100%) |
4346 |
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| QuadGolden.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| QuadGolden.h |
45 (100%) |
13 (100%) |
17 (100%) |
15 (100%) |
4252 |
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| Queue.h |
279 (100%) |
118 (100%) |
86 (100%) |
75 (100%) |
4346 |
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| Range.h |
307 (99%) |
126 (100%) |
78 (97%) |
103 (100%) |
4245 |
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| Ranking.h |
1540 (100%) |
1012 (100%) |
201 (100%) |
327 (100%) |
4087 |
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| RootFinder.cc |
84 (100%) |
45 (100%) |
13 (100%) |
26 (100%) |
4252 |
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| RootFinder.h |
220 (100%) |
107 (100%) |
50 (100%) |
63 (100%) |
4252 |
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| RootFinderDerivative.cc |
72 (100%) |
36 (100%) |
13 (100%) |
23 (100%) |
4252 |
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| RootFinderDerivative.h |
206 (100%) |
104 (100%) |
45 (100%) |
57 (100%) |
4252 |
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| SVD.cc |
83 (12%) |
52 (12%) |
22 (22%) |
9 (6%) |
4359 |
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| SVD.h |
95 (16%) |
33 (17%) |
46 (21%) |
16 (9%) |
4367 |
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| Scheduler.cc |
1042 (100%) |
724 (100%) |
128 (100%) |
190 (100%) |
4204 |
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| Scheduler.h |
572 (100%) |
280 (100%) |
169 (100%) |
123 (100%) |
3948 |
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| Secant.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| Secant.h |
44 (100%) |
13 (100%) |
16 (100%) |
15 (100%) |
4252 |
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| Segment.h |
387 (99%) |
147 (100%) |
117 (98%) |
123 (100%) |
4359 |
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| SegmentMap.h |
25 (100%) |
16 (100%) |
7 (100%) |
2 (100%) |
4359 |
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| SegmentSet.h |
562 (99%) |
311 (99%) |
121 (100%) |
130 (100%) |
4359 |
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| SegmentTree.h |
472 (100%) |
205 (100%) |
134 (100%) |
133 (100%) |
4032 |
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| SmartPtr.h |
175 (96%) |
68 (98%) |
60 (93%) |
47 (97%) |
3992 |
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| SmithWaterman.cc |
115 (100%) |
73 (100%) |
14 (100%) |
28 (100%) |
4207 |
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| SmithWaterman.h |
171 (100%) |
59 (100%) |
64 (100%) |
48 (100%) |
4207 |
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| SortedBuffer.h |
159 (100%) |
76 (100%) |
32 (100%) |
51 (100%) |
4057 |
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| SteepestDescent.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| SteepestDescent.h |
61 (100%) |
13 (100%) |
27 (100%) |
21 (100%) |
4346 |
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| Steffenson.cc |
52 (100%) |
11 (100%) |
24 (100%) |
17 (100%) |
4346 |
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| Steffenson.h |
44 (100%) |
13 (100%) |
16 (100%) |
15 (100%) |
4252 |
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| StreamRedirect.h |
357 (100%) |
175 (100%) |
88 (100%) |
94 (100%) |
4359 |
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| StrideIterator.h |
316 (99%) |
186 (100%) |
67 (95%) |
63 (100%) |
4359 |
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| TypeInfo.cc |
103 (96%) |
50 (100%) |
23 (85%) |
30 (100%) |
4359 |
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| TypeInfo.h |
144 (97%) |
27 (100%) |
56 (93%) |
61 (100%) |
4359 |
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| Vector.cc |
616 (34%) |
491 (35%) |
48 (36%) |
77 (28%) |
4359 |
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| Vector.h |
368 (21%) |
120 (29%) |
134 (18%) |
114 (19%) |
4359 |
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| VectorBase.cc |
216 (98%) |
154 (100%) |
37 (90%) |
25 (100%) |
3871 |
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| VectorBase.h |
253 (98%) |
60 (100%) |
132 (97%) |
61 (100%) |
4359 |
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| VectorConstView.cc |
90 (95%) |
70 (100%) |
11 (73%) |
9 (100%) |
4207 |
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| VectorConstView.h |
120 (96%) |
25 (100%) |
68 (94%) |
27 (100%) |
4359 |
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| VectorExpression.h |
166 (100%) |
80 (100%) |
47 (100%) |
39 (100%) |
4359 |
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| VectorMutable.cc |
121 (88%) |
99 (90%) |
14 (70%) |
8 (100%) |
4359 |
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| VectorMutable.h |
164 (96%) |
56 (100%) |
69 (93%) |
39 (97%) |
4359 |
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| VectorView.cc |
144 (97%) |
112 (100%) |
17 (80%) |
15 (100%) |
4207 |
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| VectorView.h |
187 (97%) |
50 (100%) |
101 (95%) |
36 (100%) |
4359 |
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| WeNNI.cc |
54 (28%) |
38 (33%) |
13 (22%) |
3 (14%) |
4207 |
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| WeNNI.h |
57 (29%) |
23 (39%) |
21 (24%) |
13 (26%) |
4359 |
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| WeightIterator.h |
100 (98%) |
44 (100%) |
39 (95%) |
17 (100%) |
4359 |
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| WeightedIterator.h |
320 (100%) |
123 (100%) |
96 (100%) |
101 (100%) |
3461 |
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| WeightedIteratorArchetype.h |
277 (100%) |
128 (100%) |
89 (100%) |
60 (100%) |
4359 |
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| boost_exception_ptr.h |
43 (100%) |
9 (100%) |
21 (100%) |
13 (100%) |
3047 |
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| concept_check.h |
369 (100%) |
190 (100%) |
99 (100%) |
80 (100%) |
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| config_public.h.in |
227 (100%) |
0 |
194 (100%) |
33 (100%) |
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| deprecate.h |
67 (100%) |
22 (100%) |
30 (100%) |
15 (100%) |
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| getvector.h |
160 (100%) |
90 (100%) |
32 (100%) |
38 (100%) |
4207 |
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| iterator_traits.h |
811 (99%) |
279 (100%) |
278 (97%) |
254 (100%) |
4359 |
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| kNNI.cc |
36 (21%) |
23 (25%) |
12 (21%) |
1 (5%) |
4207 |
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| kNNI.h |
37 (23%) |
14 (29%) |
18 (24%) |
5 (14%) |
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| mAligner.cc |
159 (100%) |
102 (100%) |
18 (100%) |
39 (100%) |
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| mAligner.h |
647 (100%) |
383 (100%) |
145 (100%) |
119 (100%) |
4356 |
peter |
| mAlignerBase.cc |
137 (100%) |
76 (100%) |
14 (100%) |
47 (100%) |
4353 |
peter |
| mAlignerBase.h |
207 (100%) |
67 (100%) |
62 (100%) |
78 (100%) |
4356 |
peter |
| mNeedlemanWunsch.cc |
86 (100%) |
51 (100%) |
13 (100%) |
22 (100%) |
4353 |
peter |
| mNeedlemanWunsch.h |
150 (100%) |
54 (100%) |
48 (100%) |
48 (100%) |
4353 |
peter |
| mSemiLocalAligner.cc |
112 (100%) |
73 (100%) |
13 (100%) |
26 (100%) |
4353 |
peter |
| mSemiLocalAligner.h |
197 (100%) |
69 (100%) |
70 (100%) |
58 (100%) |
4353 |
peter |
| mSmithWaterman.cc |
89 (100%) |
52 (100%) |
13 (100%) |
24 (100%) |
4353 |
peter |
| mSmithWaterman.h |
148 (100%) |
52 (100%) |
48 (100%) |
48 (100%) |
4353 |
peter |
| mSmithWaterman2.cc |
228 (100%) |
153 (100%) |
16 (100%) |
59 (100%) |
4353 |
peter |
| mSmithWaterman2.h |
336 (100%) |
161 (100%) |
86 (100%) |
89 (100%) |
4353 |
peter |
| merge.h |
341 (100%) |
163 (100%) |
100 (100%) |
78 (100%) |
3225 |
peter |
| multiprocess.h |
237 (100%) |
139 (100%) |
53 (100%) |
45 (100%) |
4076 |
peter |
| round.h |
73 (100%) |
31 (100%) |
23 (100%) |
19 (100%) |
4059 |
peter |
| sort_index.h |
305 (100%) |
146 (100%) |
101 (100%) |
58 (100%) |
3550 |
peter |
| split.cc |
101 (100%) |
59 (100%) |
18 (100%) |
24 (100%) |
4348 |
peter |
| split.h |
66 (100%) |
15 (100%) |
29 (100%) |
22 (100%) |
2898 |
peter |
| stl_utility.cc |
160 (63%) |
127 (76%) |
20 (33%) |
13 (46%) |
4359 |
peter |
| stl_utility.h |
1356 (90%) |
563 (93%) |
441 (87%) |
352 (90%) |
4359 |
peter |
| utility.cc |
332 (61%) |
255 (63%) |
28 (42%) |
49 (66%) |
4359 |
peter |
| utility.h |
1164 (90%) |
529 (95%) |
316 (85%) |
319 (88%) |
4359 |
peter |
| version.cc |
65 (97%) |
26 (100%) |
19 (90%) |
20 (100%) |
2919 |
peter |
| version.h |
10 (100%) |
2 (100%) |
8 (100%) |
0 |
4359 |
peter |
| yat_assert.h |
102 (94%) |
40 (97%) |
40 (88%) |
22 (100%) |
4359 |
peter |
| Total |
41988 (74%) |
21055 (75%) |
10525 (72%) |
10408 (75%) |
4373 |
peter |
![[plot]](../../../../../add/images/comments/yat/utility/index.png)