scripts - svndigest

baseplugins/extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/grid/scripts

Node	Lines	Code	Comments	Other	Revision	Author
../
alignment_statistics.sh	54	25	18	11	6640	nicklas
allele_counter.R	83	0	75	8	7278	nicklas
ascat.sh	121	73	30	18	7341	nicklas
beta_values.R	194	0	143	51	6886	nicklas
bwa-mem2.sh	323	222	57	44	7183	nicklas
check-illumina-directory.sh	45	40	1	4	6678	nicklas
demux-utils.sh	196	135	46	15	6955	nicklas
fix_cufflinks_tracking_id.sh	24	1	14	9	6675	nicklas
gc_stat.py	88	0	67	21	6656	nicklas
get_run_parameters.sh	48	32	10	6	6665	nicklas
hisat.sh	222	165	33	24	6676	nicklas
hisat2023.sh	148	99	29	20	6814	nicklas
hiseq_status.sh	88	36	38	14	6663	nicklas
import-fastq.sh	104	68	21	15	6669	nicklas
legacy.sh	147	95	32	20	6675	nicklas
mbaf.sh	83	52	20	11	6669	nicklas
methylation-beta.sh	96	56	21	19	6875	nicklas
mutation_signature.R	143	0	110	33	6656	nicklas
nextseq_status.sh	68	27	31	10	6663	nicklas
novaseq_status.sh	92	40	38	14	6663	nicklas
readlength_averager.awk	21	0	12	9	6649	nicklas
reggie-utils.sh	136	92	30	14	7106	nicklas
rnaseq-demux.sh	235	157	45	33	6669	nicklas
run_ascat.R	124	0	104	20	7421	nicklas
singlecolumnaverager.awk	31	0	22	9	6640	nicklas
stderrwrap.sh	37	13	15	9	6656	nicklas
stdwrap.sh	38	13	16	9	6630	nicklas
stringtie.sh	114	78	23	13	6669	nicklas
stringtie2023.sh	77	46	19	12	6820	nicklas
targeted-genotyping.sh	164	109	34	21	6669	nicklas
variantcall-utils.sh	145	92	41	12	6665	nicklas
variantcall.sh	207	139	46	22	6669	nicklas
wgs_paired_vcall.sh	405	295	52	58	7439	nicklas
wgs_pon_build.sh	119	80	14	25	7415	nicklas
wgs_pon_vcall.sh	188	130	26	32	7415	nicklas
Total	4408	2410	1333	665	7439	nicklas

Author	Lines	Code	Comments	Other	Revision	Date
nicklas	4408	2410	1333	665	7439	2023-11-16 12:27
Total	4408	2410	1333	665	7439	2023-11-16 12:27